R 语言 安装RODBC包 报错 configure: error: "ODBC headers sql.h and sqlext.h not found" 解决方法...

在Linux 下，给R 安装RODBC包，报错：

> install.packages("~/R/library/RODBC_1.3-3.tar.gz",repos = NULL)

Warning in install.packages :

argument 'lib' is missing: using '/home/dave/R/library'

* installing *source* package ‘RODBC’ ...

checking for gcc... gcc -m64 -std=gnu99

checking for C compiler default output filename... a.out

checking whether the C compiler works...yes

checking whether we are cross compiling...no

checking for suffix of executables...

checking for suffix of object files... o

checking whether we are using the GNU Ccompiler... yes

checking whether gcc -m64 -std=gnu99accepts -g... yes

checking for gcc -m64 -std=gnu99 option toaccept ANSI C... none needed

checking how to run the C preprocessor...gcc -m64 -std=gnu99 -E

checking for egrep... grep -E

checking for ANSI C header files... yes

checking for sys/types.h... yes

checking for sys/stat.h... yes

checking for stdlib.h... yes

checking for string.h... yes

checking for memory.h... yes

checking for strings.h... yes

checking for inttypes.h... yes

checking for stdint.h... yes

checking for unistd.h... yes

checking sql.h usability... no

checking sql.h presence... no

checking for sql.h... no

checking sqlext.h usability... no

checking sqlext.h presence... no

checking for sqlext.h... no

configure: error: "ODBC headers sql.hand sqlext.h not found"

ERROR: configuration failed for package‘RODBC’

* removing ‘/home/dave/R/library/RODBC’

Warning in install.packages :

installation of package '/home/dave/R/library/RODBC_1.3-3.tar.gz' hadnon-zero exit status

出现错误：

configure: error:"ODBC headers sql.h and sqlext.h not found"

是因为没有在Linux 下安装ODBC包。RODBC 需要 unixODBC 和unixODBC development 包，使用YUM 安装之后即可解决。

Linux 使用光盘搭建 本地 YUM 服务器

http://blog.csdn.net/tianlesoftware/article/details/7302358

[root@rac1 mnt]# yum install unixODBC

Loaded plugins: refresh-packagekit

Setting up Install Process

Resolving Dependencies

--> Running transaction check

---> Package unixODBC.x86_640:2.2.14-11.el6 will be installed

--> Finished Dependency Resolution

Dependencies Resolved

====================================================================================================

Package Arch Version Repository Size

====================================================================================================

Installing:

unixODBC x86_64 2.2.14-11.el6 dave 378 k

Transaction Summary

====================================================================================================

Install 1 Package(s)

Total download size: 378 k

Installed size: 1.1 M

Is this ok [y/N]: y

Downloading Packages:

Running rpm_check_debug

Running Transaction Test

Transaction Test Succeeded

Running Transaction

Warning: RPMDB altered outside of yum.

** Found 3 pre-existing rpmdb problem(s),'yum check' output follows:

R-core-2.10.0-2.el5.x86_64 has missingrequires of libtcl8.4.so()(64bit)

R-core-2.10.0-2.el5.x86_64 has missingrequires of libtk8.4.so()(64bit)

R-core-2.10.0-2.el5.x86_64 has missingrequires of perl(File::Copy::Recursive)

Installing : unixODBC-2.2.14-11.el6.x86_641/1

Installed:

unixODBC.x86_64 0:2.2.14-11.el6

Complete!

[root@rac1 mnt]# yum install unixODBC-devel

Loaded plugins: refresh-packagekit

Setting up Install Process

Resolving Dependencies

--> Running transaction check

---> Package unixODBC-devel.x86_640:2.2.14-11.el6 will be installed

--> Finished Dependency Resolution

Dependencies Resolved

====================================================================================================

Package Arch Version Repository Size

====================================================================================================

Installing:

unixODBC-devel x86_64 2.2.14-11.el6 dave 53 k

Transaction Summary

====================================================================================================

Install 1 Package(s)

Total download size: 53 k

Installed size: 182 k

Is this ok [y/N]: y

Downloading Packages:

Running rpm_check_debug

Running Transaction Test

Transaction Test Succeeded

Running Transaction

Installing : unixODBC-devel-2.2.14-11.el6.x86_641/1

Installed:

unixODBC-devel.x86_64 0:2.2.14-11.el6

Complete!

[root@rac1 mnt]#

安装完unixODBC后在安装RODBC：

> install.packages("~/R/library/RODBC_1.3-3.tar.gz",repos = NULL)

Warning in install.packages :

argument 'lib' is missing: using '/home/dave/R/library'

* installing *source* package ‘RODBC’ ...

checking for gcc... gcc -m64 -std=gnu99

checking for C compiler default output filename... a.out

checking whether the C compiler works...yes

checking whether we are cross compiling...no

checking for suffix of executables...

checking for suffix of object files... o

checking whether we are using the GNU Ccompiler... yes

checking whether gcc -m64 -std=gnu99accepts -g... yes

checking for gcc -m64 -std=gnu99 option toaccept ANSI C... none needed

checking how to run the C preprocessor...gcc -m64 -std=gnu99 -E

checking for egrep... grep -E

checking for ANSI C header files... yes

checking for sys/types.h... yes

checking for sys/stat.h... yes

checking for stdlib.h... yes

checking for string.h... yes

checking for memory.h... yes

checking for strings.h... yes

checking for inttypes.h... yes

checking for stdint.h... yes

checking for unistd.h... yes

checking sql.h usability... yes

checking sql.h presence... yes

checking for sql.h... yes

checking sqlext.h usability... yes

checking sqlext.h presence... yes

checking for sqlext.h... yes

checking for library containingSQLTables... -lodbc

checking for SQLLEN... yes

checking for SQLULEN... yes

checking for long... yes

checking size of long... 8

configure: creating ./config.status

config.status: creating src/Makevars

config.status: creating src/config.h

** libs

gcc -m64 -std=gnu99 -I/usr/include/R -I.-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2-fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -cRODBC.c -o RODBC.o

gcc -m64 -std=gnu99 -shared-L/usr/local/lib64 -o RODBC.so RODBC.o -lodbc -L/usr/lib64/R/lib -lR

** R

** inst

** preparing package for lazy loading

** help

*** installing help indices

** building package indices ...

* DONE (RODBC)

成功安装。

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