想更新deeptools,但是发现无论如何都下载不了,并且有以下报错
(atac) vip9t07@tpm9-desktop:~/project/atac/new$ conda update -n atac deeptools
Collecting package metadata (current_repodata.json): failed
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 375, in _load
repodata_fn=self.repodata_fn)
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 808, in fetch_repodata_remote_request
raise Response304ContentUnchanged()
conda.core.subdir_data.Response304ContentUnchanged
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 1079, in __call__
return func(*args, **kwargs)
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 84, in _main
exit_code = do_call(args, p)
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 83, in do_call
return getattr(module, func_name)(args, parser)
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/cli/main_update.py", line 20, in execute
install(args, parser, 'update')
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 265, in install
should_retry_solve=(_should_retry_unfrozen or repodata_fn != repodata_fns[-1]),
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 117, in solve_for_transaction
should_retry_solve)
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 158, in solve_for_diff
force_remove, should_retry_solve)
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 262, in solve_final_state
ssc = self._collect_all_metadata(ssc)
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 88, in decorated
return f(*args, **kwds)
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 425, in _collect_all_metadata
index, r = self._prepare(prepared_specs)
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 1021, in _prepare
self.subdirs, prepared_specs, self._repodata_fn)
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/index.py", line 289, in get_reduced_index
repodata_fn=repodata_fn)
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 140, in query_all
result = tuple(concat(executor.map(subdir_query, channel_urls)))
File "/home/data/vip9t07/miniconda3/lib/python3.6/concurrent/futures/_base.py", line 556, in result_iterator
yield future.result()
File "/home/data/vip9t07/miniconda3/lib/python3.6/concurrent/futures/_base.py", line 398, in result
return self.__get_result()
File "/home/data/vip9t07/miniconda3/lib/python3.6/concurrent/futures/_base.py", line 357, in __get_result
raise self._exception
File "/home/data/vip9t07/miniconda3/lib/python3.6/concurrent/futures/thread.py", line 55, in run
result = self.fn(*self.args, **self.kwargs)
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 133, in <lambda>
package_ref_or_match_spec))
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 145, in query
self.load()
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 209, in load
_internal_state = self._load()
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 390, in _load
mod_etag_headers.get('_mod'))
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 438, in _read_local_repdata
_internal_state = self._process_raw_repodata_str(raw_repodata_str)
File "/home/data/vip9t07/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 476, in _process_raw_repodata_str
json_obj = json.loads(raw_repodata_str or '{}')
File "/home/data/vip9t07/miniconda3/lib/python3.6/json/__init__.py", line 354, in loads
return _default_decoder.decode(s)
File "/home/data/vip9t07/miniconda3/lib/python3.6/json/decoder.py", line 339, in decode
obj, end = self.raw_decode(s, idx=_w(s, 0).end())
File "/home/data/vip9t07/miniconda3/lib/python3.6/json/decoder.py", line 355, in raw_decode
obj, end = self.scan_once(s, idx)
json.decoder.JSONDecodeError: Unterminated string starting at: line 150276 column 17 (char 4718399)
`$ /home/data/vip9t07/miniconda3/bin/conda update -n atac deeptools`
environment variables:
CIO_TEST=<not set>
CONDA_DEFAULT_ENV=atac
CONDA_EXE=/home/data/vip9t07/miniconda3/bin/conda
CONDA_PREFIX=/home/data/vip9t07/miniconda3/envs/atac
CONDA_PREFIX_1=/home/data/vip9t07/miniconda3
CONDA_PROMPT_MODIFIER=(atac)
CONDA_PYTHON_EXE=/home/data/vip9t07/miniconda3/bin/python
CONDA_ROOT=/home/data/vip9t07/miniconda3
CONDA_SHLVL=2
CURL_CA_BUNDLE=<not set>
JAVA_LD_LIBRARY_PATH=/home/data/vip9t07/miniconda3/envs/atac/lib/server
PATH=/home/data/vip9t07/miniconda3/bin:/home/data/vip9t07/miniconda3/envs/a
tac/bin:/home/data/vip9t07/miniconda3/condabin:/usr/local/sbin:/usr/lo
cal/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/sna
p/bin:/home/data/vip9t07/biosoft/bowtie2/bowtie2-2.4.2-linux-x86_64:/h
ome/data/vip9t07/biosoft/samtools/samtools-1.12
REQUESTS_CA_BUNDLE=<not set>
SSL_CERT_FILE=<not set>
active environment : atac
active env location : /home/data/vip9t07/miniconda3/envs/atac
shell level : 2
user config file : /home/data/vip9t07/.condarc
populated config files : /home/data/vip9t07/.condarc
conda version : 4.10.1
conda-build version : not installed
python version : 3.6.2.final.0
virtual packages : __linux=5.8.0=0
__glibc=2.31=0
__unix=0=0
__archspec=1=x86_64
base environment : /home/data/vip9t07/miniconda3 (writable)
conda av data dir : /home/data/vip9t07/miniconda3/etc/conda
conda av metadata url : https://repo.anaconda.com/pkgs/main
channel URLs : https://mirrors.ustc.edu.cn/anaconda/cloud/bioconda/linux-64
https://mirrors.ustc.edu.cn/anaconda/cloud/bioconda/noarch
https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free/linux-64
https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free/noarch
https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/linux-64
https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/noarch
https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64
https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/noarch
https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /home/data/vip9t07/miniconda3/pkgs
/home/data/vip9t07/.conda/pkgs
envs directories : /home/data/vip9t07/miniconda3/envs
/home/data/vip9t07/.conda/envs
platform : linux-64
user-agent : conda/4.10.1 requests/2.25.1 CPython/3.6.2 Linux/5.8.0-50-generic ubuntu/20.04.2 glibc/2.31
UID:GID : 1012:1014
netrc file : None
offline mode : False
An unexpected error has occurred. Conda has prepared the above report.
If submitted, this report will be used by core maintainers to improve
future releases of conda.
Would you like conda to send this report to the core maintainers?
[y/N]: y
Upload successful.
Thank you for helping to improve conda.
Opt-in to always sending reports (and not see this message again)
by running
$ conda config --set report_errors true
按照二. conda install安装不了任何包,报一大段错误
方法,还是不行,并且出现了新的报错
(atac) vip9t07@tpm9-desktop:~/project/atac/new$ conda clean -i
(atac) vip9t07@tpm9-desktop:~/project/atac/new$ conda install -c bioconda deeptools
Collecting package metadata (current_repodata.json): failed
CondaHTTPError: HTTP 000 CONNECTION FAILED for url <https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/noarch/current_repodata.json>
Elapsed: -
An HTTP error occurred when trying to retrieve this URL.
HTTP errors are often intermittent, and a simple retry will get you on your way.
'https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/noarch'
继续找解决办法
Python&aconda系列:conda创建虚拟环境、切换环境 报错中的`三. conda create, conda install, conda update报错
(atac) vip9t07@tpm9-desktop:~$ conda config --remove channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
(atac) vip9t07@tpm9-desktop:~$ conda config --set show_channel_urls yes
光删除了conda-forge的镜像源依然不能解决问题
继续
四. CondaHTTPError: HTTP 000 CONNECTION FAILED for url <https://mirrors.tuna.tsinghua.edu.cn/anaconda
将中科大的镜像源加入并删除其他清华镜像源及default
(atac) vip9t07@tpm9-desktop:~$ vim ~/.condarc
(atac) vip9t07@tpm9-desktop:~$ cat ~/.condarc
channels:
- https://mirrors.ustc.edu.cn/anaconda/pkgs/free/
- https://mirrors.ustc.edu.cn/anaconda/cloud/bioconda/
show_channel_urls: true
可以了!
(当然这只是我以为的可以了,实际上后续还经历了一系列醉生梦死的艰辛求知路……)
(ywx_pytorch_env) C:\Users\1>conda install xlwt
Collecting package metadata (current_repodata.json): failed
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\subdir_data.py", line 251, in _load
raise UnavailableInvalidChannel(self.url_w_repodata_fn, 404)
conda.exceptions.UnavailableInvalidChannel: The channel is not accessible or is invalid.
channel name: anaconda/pkgs/free
channel url: https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free
error code: 404
You will need to adjust your conda configuration to proceed.
Use `conda config --show channels` to view your configuration's current state,
and use `conda config --show-sources` to view config file locations.
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\subdir_data.py", line 248, in _load
repodata_fn=self.repodata_fn)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\subdir_data.py", line 598, in fetch_repodata_remote_request
raise Response304ContentUnchanged()
conda.core.subdir_data.Response304ContentUnchanged
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\exceptions.py", line 1078, in __call__
return func(*args, **kwargs)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\cli\main.py", line 84, in _main
exit_code = do_call(args, p)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\cli\conda_argparse.py", line 82, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\cli\main_install.py", line 20, in execute
install(args, parser, 'install')
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\cli\install.py", line 265, in install
should_retry_solve=(_should_retry_unfrozen or repodata_fn != repodata_fns[-1]),
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\solve.py", line 117, in solve_for_transaction
should_retry_solve)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\solve.py", line 158, in solve_for_diff
force_remove, should_retry_solve)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\solve.py", line 262, in solve_final_state
ssc = self._collect_all_metadata(ssc)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\common\io.py", line 88, in decorated
return f(*args, **kwds)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\solve.py", line 415, in _collect_all_metadata
index, r = self._prepare(prepared_specs)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\solve.py", line 1004, in _prepare
self.subdirs, prepared_specs, self._repodata_fn)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\index.py", line 229, in get_reduced_index
repodata_fn=repodata_fn)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\subdir_data.py", line 105, in query_all
result = tuple(concat(executor.map(subdir_query, channel_urls)))
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\concurrent\futures\_base.py", line 586, in result_iterator
yield fs.pop().result()
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\concurrent\futures\_base.py", line 425, in result
return self.__get_result()
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\concurrent\futures\_base.py", line 384, in __get_result
raise self._exception
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\concurrent\futures\thread.py", line 56, in run
result = self.fn(*self.args, **self.kwargs)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\subdir_data.py", line 98, in <lambda>
package_ref_or_match_spec))
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\subdir_data.py", line 110, in query
self.load()
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\subdir_data.py", line 174, in load
_internal_state = self._load()
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\subdir_data.py", line 255, in _load
return self._load()
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\subdir_data.py", line 263, in _load
mod_etag_headers.get('_mod'))
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\subdir_data.py", line 311, in _read_local_repdata
_internal_state = self._process_raw_repodata_str(raw_repodata_str)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\conda\core\subdir_data.py", line 349, in _process_raw_repodata_str
json_obj = json.loads(raw_repodata_str or '{}')
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\json\__init__.py", line 354, in loads
return _default_decoder.decode(s)
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\json\decoder.py", line 339, in decode
obj, end = self.raw_decode(s, idx=_w(s, 0).end())
File "C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\json\decoder.py", line 355, in raw_decode
obj, end = self.scan_once(s, idx)
json.decoder.JSONDecodeError: Unterminated string starting at: line 78753 column 5 (char 2031407)
`$ C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\Scripts\conda-script.py install xlwt`
environment variables:
CIO_TEST=<not set>
CONDA_DEFAULT_ENV=ywx_pytorch_env
CONDA_EXE=C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\condabin\..\Scripts\cond
a.exe
CONDA_EXES="C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\condabin\..\Scripts\con
da.exe"
CONDA_PREFIX=C:\ProgramData\Anaconda3\envs\ywx_pytorch_env
CONDA_PREFIX_1=C:\ProgramData\Anaconda3
CONDA_PROMPT_MODIFIER=(ywx_pytorch_env)
CONDA_PYTHON_EXE=C:\ProgramData\Anaconda3\python.exe
CONDA_ROOT=C:\ProgramData\Anaconda3\envs\ywx_pytorch_env
CONDA_SHLVL=2
CUDA_BIN_PATH=C:\Program Files\NVIDIA GPU Computing Toolkit\CUDA\v9.0\bin
CUDA_LIB_PATH=C:\Program Files\NVIDIA GPU Computing Toolkit\CUDA\v9.0\lib\x64
CUDA_PATH=C:\Program Files\NVIDIA GPU Computing Toolkit\CUDA\v9.0
CUDA_SDK_BIN_PATH=C:\ProgramData\NVIDIA Corporation\CUDA Samples\v9.0\bin\win64
CUDA_SDK_LIB_PATH=C:\ProgramData\NVIDIA Corporation\CUDA Samples\v9.0\common\lib\x64
CUDA_SDK_PATH=C:\ProgramData\NVIDIA Corporation\CUDA Samples\v9.0
HOMEPATH=\Users\ywx
NVTOOLSEXT_PATH=C:\Program Files\NVIDIA Corporation\NvToolsExt\
PATH=C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\lib\site-packages\pywin3
2_system32;C:\ProgramData\Anaconda3\envs\ywx_pytorch_env;C:\ProgramDat
a\Anaconda3\envs\ywx_pytorch_env\Library\mingw-w64\bin;C:\ProgramData\
Anaconda3\envs\ywx_pytorch_env\Library\usr\bin;C:\ProgramData\Anaconda
3\envs\ywx_pytorch_env\Library\bin;C:\ProgramData\Anaconda3\envs\ywx_p
ytorch_env\Scripts;C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\bin;C
:\ProgramData\Anaconda3\envs\ywx_pytorch_env;C:\ProgramData\Anaconda3\
envs\ywx_pytorch_env\Library\mingw-w64\bin;C:\ProgramData\Anaconda3\en
vs\ywx_pytorch_env\Library\usr\bin;C:\ProgramData\Anaconda3\envs\ywx_p
ytorch_env\Library\bin;C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\S
cripts;C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\bin;C:\ProgramDat
a\Anaconda3\condabin;D:\tools\Python\Python35\Scripts;D:\tools\Python\
Python35;C:\Program Files (x86)\Common
Files\Oracle\Java\javapath;C:\Program Files\NVIDIA GPU Computing
Toolkit\CUDA\v9.0\bin;C:\Program Files\NVIDIA GPU Computing Toolkit\CU
DA\v9.0\libnvvp;C:\ProgramData\Anaconda3;C:\ProgramData\Anaconda3\Libr
ary\mingw-w64\bin;C:\ProgramData\Anaconda3\Library\usr\bin;C:\ProgramD
ata\Anaconda3\Library\bin;C:\ProgramData\Anaconda3\Scripts;C:\xw;C:\xw
\Library\mingw-w64\bin;C:\xw\Library\usr\bin;C:\xw\Library\bin;C:\xw\S
cripts;C:\Windows\system32;C:\Windows;C:\Windows\System32\Wbem;C:\Wind
ows\System32\WindowsPowerShell\v1.0;C:\Program
Files\MATLAB\R2014b\runtime\win64;C:\Program
Files\MATLAB\R2014b\bin;C:\Program
Files\MATLAB\R2014b\polyspace\bin;C:\Program Files (x86)\NVIDIA Corpor
ation\PhysX\Common;C:\Users\ykm\software\MEGA-X;C:\WINDOWS\system32;C:
\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShel
l\v1.0;C:\WINDOWS\System32\OpenSSH;C:\Program Files\NVIDIA GPU
Computing Toolkit\CUDA\v9.0;C:\Program Files\NVIDIA GPU Computing
Toolkit\CUDA\v9.0\lib\x64;C:\Program Files\MySQL\MySQL Server
8.0\bin;C:\Program Files\NVIDIA GPU Computing Toolkit\CUDA\v9.0\extras
\CUPTI\libx64;D:\vs2015\Common7\Tools;D:\Visual Studio 2015 缁犫偓娴f挷绗撴稉姘
卞\VC\bin\x86_amd64;F:\zx\wangyutaosrt\Git\bin;D:\tools\Git\cmd;D:\Vis
ual Studio 2015 缁犫偓娴f挷绗撴稉姘卞\VC\bin;C:\Program Files (x86)\Windows
Kits\8.1\Windows Performance
Toolkit;C:\Users\ywx\AppData\Local\Microsoft\WindowsApps;.
PSMODULEPATH=C:\Program Files\WindowsPowerShell\Modules;C:\WINDOWS\system32\Windows
PowerShell\v1.0\Modules
REQUESTS_CA_BUNDLE=<not set>
SSL_CERT_FILE=<not set>
VBOX_MSI_INSTALL_PATH=C:\Users\cxj\vbox\
active environment : base
active env location : C:\ProgramData\Anaconda3\envs\ywx_pytorch_env
shell level : 2
user config file : C:\Users\ywx\.condarc
populated config files : C:\Users\ywx\.condarc
conda version : 4.8.0
conda-build version : 3.18.11
python version : 3.6.9.final.0
virtual packages : __cuda=10.1
base environment : C:\ProgramData\Anaconda3\envs\ywx_pytorch_env (writable)
channel URLs : https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/peterjc123/win-64
https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/peterjc123/noarch
https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/pytorch/win-64
https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/pytorch/noarch
https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main/win-64
https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main/noarch
https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free/win-64
https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free/noarch
https://repo.anaconda.com/pkgs/main/win-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/win-64
https://repo.anaconda.com/pkgs/r/noarch
https://repo.anaconda.com/pkgs/msys2/win-64
https://repo.anaconda.com/pkgs/msys2/noarch
package cache : C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\pkgs
C:\Users\ywx\.conda\pkgs
C:\Users\ywx\AppData\Local\conda\conda\pkgs
envs directories : C:\ProgramData\Anaconda3\envs\ywx_pytorch_env\envs
C:\Users\ywx\.conda\envs
C:\Users\ywx\AppData\Local\conda\conda\envs
platform : win-64
user-agent : conda/4.8.0 requests/2.22.0 CPython/3.6.9 Windows/10 Windows/10.0.18362
administrator : False
netrc file : None
offline mode : False
An unexpected error has occurred. Conda has prepared the above report.
If submitted, this report will be used by core maintainers to improve
future releases of conda.
Would you like conda to send this report to the core maintainers?
[y/N]: n
No report sent. To permanently opt-out, use
$ conda config --set report_errors false
1、有人说是防火墙的问题,输入conda config --set ssl_verify false
还是不行
2、有人说conda损坏,重装,,,,想想还是算了,太麻烦
3、终极解决办法:输入 conda clean -i
完美解决!!
详情见 三. Conda无法安装或更新的问题
用conda安装任何东西都报错. 开始怀疑是公司的鬼网络问题.
将.condarc
重命名, 重新尝试, 一切又很正常, 以为是清华源TUNA的问题, 还想去https://github.com/tuna/ 报错.
后来一次将https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/r channel
一行在.condarc
中删掉后, 一切又正常了. 莫名其妙啊…
最开始时怀疑是 raise UnavailableInvalidChannel(self.url_w_repodata_fn, 404)的问题, 以为是清华源那边缺失channeldata.json导致找不到subdir, 但关键的文件是repodata.json还是存在且一样的. 可能不是TUNA的问题.
官方pkgs/r源 https://repo.anaconda.com/pkgs/r
清华pkgs/r源 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/r/
于是重新仔细追查错误, 发现这个错误有三处:
raise UnavailableInvalidChannel(self.url_w_repodata_fn, 404)
raise Response304ContentUnchanged()
json.decoder.JSONDecodeError: Unterminated string starting at: line 184947 column 5 (char 5586731)
第一个网络是可以下载对应repodata.json的, 第二个304重定向应该不是, 第三个是json解码的问题. 搜了一下, 找到以下帖子:
JSONDecodeError with on-disk corrupted repodata #7190
噢, 原来还是公司网络的锅. 肯定是之前update repo信息时网络有问题, 于是就出现了污染.
conda clean -i
然后重新随便install 个东西, 会重新下载repo信息. 问题解决. NND的公司网络…
附错误内容:
$ conda install numpy
Collecting package metadata (current_repodata.json): failed
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 251, in _load
raise UnavailableInvalidChannel(self.url_w_repodata_fn, 404)
conda.exceptions.UnavailableInvalidChannel: The channel is not accessible or is invalid.
channel name: anaconda/pkgs/r
channel url: https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/r
error code: 404
You will need to adjust your conda configuration to proceed.
Use `conda config --show channels` to view your configuration's current state,
and use `conda config --show-sources` to view config file locations.
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 248, in _load
repodata_fn=self.repodata_fn)
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 598, in fetch_repodata_remote_request
raise Response304ContentUnchanged()
conda.core.subdir_data.Response304ContentUnchanged
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 1079, in __call__
return func(*args, **kwargs)
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 84, in _main
exit_code = do_call(args, p)
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 82, in do_call
return getattr(module, func_name)(args, parser)
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 20, in execute
install(args, parser, 'install')
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 265, in install
should_retry_solve=(_should_retry_unfrozen or repodata_fn != repodata_fns[-1]),
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 117, in solve_for_transaction
should_retry_solve)
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 158, in solve_for_diff
force_remove, should_retry_solve)
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 262, in solve_final_state
ssc = self._collect_all_metadata(ssc)
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 88, in decorated
return f(*args, **kwds)
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 415, in _collect_all_metadata
index, r = self._prepare(prepared_specs)
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 1011, in _prepare
self.subdirs, prepared_specs, self._repodata_fn)
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/index.py", line 228, in get_reduced_index
repodata_fn=repodata_fn)
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 105, in query_all
result = tuple(concat(executor.map(subdir_query, channel_urls)))
File "/home/hom/Softwares/miniconda3/lib/python3.6/concurrent/futures/_base.py", line 586, in result_iterator
yield fs.pop().result()
File "/home/hom/Softwares/miniconda3/lib/python3.6/concurrent/futures/_base.py", line 425, in result
return self.__get_result()
File "/home/hom/Softwares/miniconda3/lib/python3.6/concurrent/futures/_base.py", line 384, in __get_result
raise self._exception
File "/home/hom/Softwares/miniconda3/lib/python3.6/concurrent/futures/thread.py", line 56, in run
result = self.fn(*self.args, **self.kwargs)
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 98, in <lambda>
package_ref_or_match_spec))
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 110, in query
self.load()
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 174, in load
_internal_state = self._load()
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 255, in _load
return self._load()
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 263, in _load
mod_etag_headers.get('_mod'))
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 311, in _read_local_repdata
_internal_state = self._process_raw_repodata_str(raw_repodata_str)
File "/home/hom/Softwares/miniconda3/lib/python3.6/site-packages/conda/core/subdir_data.py", line 349, in _process_raw_repodata_str
json_obj = json.loads(raw_repodata_str or '{}')
File "/home/hom/Softwares/miniconda3/lib/python3.6/json/__init__.py", line 354, in loads
return _default_decoder.decode(s)
File "/home/hom/Softwares/miniconda3/lib/python3.6/json/decoder.py", line 339, in decode
obj, end = self.raw_decode(s, idx=_w(s, 0).end())
File "/home/hom/Softwares/miniconda3/lib/python3.6/json/decoder.py", line 355, in raw_decode
obj, end = self.scan_once(s, idx)
json.decoder.JSONDecodeError: Unterminated string starting at: line 184947 column 5 (char 5586731)
# 这里省去一堆本地参数
An unexpected error has occurred. Conda has prepared the above report.
If submitted, this report will be used by core maintainers to improve
future releases of conda.
Would you like conda to send this report to the core maintainers?
[y/N]:
Timeout reached. No report sent.
CondaHTTPError: HTTP 000 CONNECTION FAILED for url <https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64/current_repodata.json>
Elapsed: -
An HTTP error occurred when trying to retrieve this URL.
HTTP errors are often intermittent, and a simple retry will get you on your way.
'https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64'
原因:连不上清华的镜像。
按照网上的方法删除 -default 也没有用。
修改方法:
使用下面两个命令,将中科大的镜像加到目录中去
$conda config --add channels https://mirrors.ustc.edu.cn/anaconda/pkgs/free/
$conda config --set show_channel_urls yes
然后打开./删除其他所有镜像,以及default
$vim ~/.condarc
修改前:
然后就可以了!
看网上有人说,把https 改为http也行,没试,不知道可行否
Evan Yi
conda install安装不了任何包,报一大段错误
爱折腾的大懒猪
Conda无法安装或更新的问题
titake
CondaHTTPError: HTTP 000 CONNECTION FAILED for url <https://mirrors.tuna.tsinghua.edu.cn/anaconda/
小狼小狼_e211
conda踩坑记录1.An unexpected error has occurred. Conda has prepared the above report.