Hierarchical Cluster 层次聚类

R： Hierarchical Cluster 层次聚类

发表于2年前(2014-10-05 12:05)   阅读（ 1884） | 评论（ 0）  0人收藏此文章, 我要收藏

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目录[-]

构造数据：

聚类：

分成两个簇：

参考：

构造数据：

> dataset = matrix(c(1,2,
+ 1.2,2,
+ 8,9,
+ 0.9,1.8,
+ 7,10,
+ 8.8,9.2), nrow=6, byrow=T)
> dataset
     [,1] [,2]
[1,]  1.0  2.0
[2,]  1.2  2.0
[3,]  8.0  9.0
[4,]  0.9  1.8
[5,]  7.0 10.0
[6,]  8.8  9.2

聚类：

> d = dist(dataset)
> d
           1          2          3          4          5
2  0.2000000
3  9.8994949  9.7590983
4  0.2236068  0.3605551 10.1118742
5 10.0000000  9.8812955  1.4142136 10.2200783
6 10.6150836 10.4690019  0.8246211 10.8245092  1.9697716
> hclust(d, method = "complete" )

Call:
hclust(d = d, method = "complete" )

Cluster method   : complete
Distance         : euclidean
Number of objects: 6

> hc = hclust(d, method = "complete" )
> plot(hc)

分成两个簇：

> democut<-cutree(hc,k=2)
> democut
[1] 1 1 2 1 2 2

参考：

http://www.r-tutor.com/gpu-computing/clustering/hierarchical-cluster-analysis
http://stat.ethz.ch/R-manual/R-devel/library/stats/html/hclust.html
http://ecology.msu.montana.edu/labdsv/R/labs/lab13/lab13.html