遗传算法有很多优化和变形,本文将从最基本的遗传算法出发,以一个简单的优化问题作为例子来说明遗传算法的代码实现,比较适合已经学了相关理论知识的初学者进行实践学习。
用GA求解一元函数的最大值:
f(x) = x sin(10πx) + 2.0, x∈[-1,2]
变量x可以视为遗传算法的表现型形式,我们采用二进制编码形式。如果设定求解精度要精确到6位小数,由于区间长度为3,故将区间分为3*10^6等份,因为:
2097152 = 2^21 < 3*10^6 < 2^22 = 4194304
所以编码的二进制串长至少为22位。
我们采用二进制编码,将一个二进制串与区间[Left,Right]间对应的实数值建立对应:
假设二进制串b的十进制值为x’,则:
x = (Right-Left)*x'/(2^22-1.0)+Left;
我们通过随机产生一些个体(即随机产生一些二进制串),来初始化我们的种群。
/*****function:generation the first popolation初始化群体*****/
void GenerateInitialPopulation (void)
{
int i,j;
srand((unsigned)(time(NULL)));
for (i=0;ifor (j=0;j10)<5)?'0':'1';
}
population [i].chrom[CHROMLENGTH]='\0';
}
}
/****function: evaluate population according to certain formula衡量群体*****/
void EvaluatePopulation (void)
{
CalculateObjectValue ();
CalculateFitnessValue ();
FindBestAndWorstIndividual ();
}
/*****function: to decode a binary chromosome into a decimal integer*****/
long DecodeChromosome (char *string,int point,int length)
{
int i;
long decimal=0L;
char *pointer;
for (i=0,pointer=string+point;i'0')<<(length-1-i);
}
return (decimal);
}
/***** function:to calculate object value f(x) = x sin(10πx) + 2.0 *****/
void CalculateObjectValue (void)
{
int i;
long temp;
double x;
/*** rosenbrock function***/
for (i=0;i0,CHROMLENGTH);
x=(Right-Left)*temp/(pow(2,CHROMLENGTH)-1.0)+Left;
population[i].value=x*sin(10*PI*x)+2.0;//函数值
population[i].x=x;//对应的自变量
}
}
在本例中,目标函数在定义域内大于0,而且求函数的最大值,所以我们直接引用目标函数作为适应度函数。
/******function: to calculate fitness value *******/
void CalculateFitnessValue (void)
{
int i;
for(i=0;i
/*****function to find out the best individual so far current generation*****/
void FindBestAndWorstIndividual (void)
{
int i;
double sum=0.0;
/*** find out the best and worst individual of this generation***/
bestindividual=population[0];
worstindividual=population[0];
for(i=1;iif (population[i].fitness>bestindividual.fitness)
{bestindividual=population[i];best_index=i;}
else if(population[i].fitness/***find out the best individual so far***/
if (generation==0){ currentbest=bestindividual;}
else
{
if(bestindividual.fitness>currentbest.fitness) {currentbest=bestindividual;}
}
}
我们按照轮盘赌的方式来选择子个体,对选出来的个体,两两进行交叉操作,随机选择一个交叉点。
交叉之后进行变异操作,在二进制编码中,变异体现在位翻转上。
/*****function: generate the next generation产生新种群*****/
void GenerateNextPopulation (void)
{
SelectionOperator ();
CrossoverOperator ();
MutationOperator ();
}
/*****function: to reproduce a chromosome by roulette wheel seclection*****/
void SelectionOperator (void)
{
int i,j,index;
double p,sum=0.0;
double cfitness[POPSIZE]; /*cumulative fitness value*/
struct individual newpopulation[POPSIZE];
/***calculate relative fitness***/
for(i=0;ifor(i=0;i/***calculate cumulative fitness***/
for(i=1;i1]+cfitness[i];}
/***selection operation***/
for(i=0;i1000)/1000.0;
index=0;
while(p>cfitness[index]){index++;}
newpopulation[i]=population[index];
}
for(i=0;i/*****function:crossover two chromosome by means of one-point crossover*****/
void CrossoverOperator (void)
{
int i,j;
int index[POPSIZE];
int point,temp;
double p;
char ch;
/***make a pair of individual randomly***/
for(i=0;ifor(i=0;i/***one-point crossover operation***/
for(i=0;i1;i+=2)
{
p=random(1000)/1000.0;
if(p1)+1;
for(j=point;j1]].chrom[j];
population[index[i+1]].chrom[j]=ch;
}
}
}
}
/*****function: mutation of a chromosome*****/
void MutationOperator (void)
{
int i,j;
double p;
/*** bit mutation***/
for(i=0;ifor(j=0;j1000)/1000.0;
if(p'0')?'1':'0';}
}
}
}
/*****function:to perform evolution operation based on elitise mode. elitist model is to
replace the worst individual of this generation by the current best one保留最优个体*****/
void PerformEvolution (void)
{
if(bestindividual.fitness>currentbest.fitness){currentbest=population[best_index];}
else{population[worst_index]=currentbest;}
}
我们设定种群大小为80,交叉概率为Pc=0.6,变异概率为Pm=0.001,按照标准的遗传算法SGA,在运行到200代时获得的最佳个体为:
x=1.850549
f(x)=3.850275
chromosome=1111001100111111001011
这个个体对应的解与微分方程预计的最优解的情况吻合。
# include
# include
# include
# include
/****** the definition of constant******/
# define PI 3.14159
# define POPSIZE 80
/****** the definition of user data*****/
# define LEFT -1
# define RIGHT 2
# define CHROMLENGTH 22
# define random(x) rand()%x
const int MaxGeneration=200;
const double Pc=0.6;
const double Pm=0.001;
/***** the definition of data structure*****/
struct individual
{
char chrom[CHROMLENGTH+1];//基因
double x; //自变量
double value;//目标函数值
double fitness;//适应度
};
/***** the definition of global variables*****/
int generation;
int best_index;
int worst_index;
struct individual bestindividual; //局部最优个体
struct individual worstindividual; //局部最差个体
struct individual currentbest; //全局最优个体
struct individual population[POPSIZE];//种群
/*****declaration of prototype 原型声明*****/
void GenerateInitialPopulation (void); //初始化种群
void GenerateNextPopulation (void); //产生下一代种群
void EvaluatePopulation (void); //评估
long DecodeChromosome (char *,int,int); //对基因进行解码
void CalculateObjectValue (void); //计算目标函数值
void CalculateFitnessValue (void); //计算适应值
void FindBestAndWorstIndividual (void); //寻找最优及最差个体
void PerformEvolution (void); //进化
void SelectionOperator (void); //选择
void CrossoverOperator (void); //交叉
void MutationOperator (void); //变异
void OutputTextReport (void);
/***** main program*****/
int main (void)
{
generation=0;
GenerateInitialPopulation (); //调用初始群体函数
EvaluatePopulation (); //第一次评估
while (generation//迭代一定代数
{
generation++;
GenerateNextPopulation (); //根据评估的结果来产生下一代
EvaluatePopulation (); //对新一代种群进行评估
PerformEvolution (); //进化
OutputTextReport ();
}
return 0;
}
/*****function:generation the first popolation初始化群体*****/
void GenerateInitialPopulation (void)
{
int i,j;
srand((unsigned)(time(NULL)));
for (i=0;ifor (j=0;j10)<5)?'0':'1';
}
population [i].chrom[CHROMLENGTH]='\0';
}
}
/*****function: generate the next generation产生新种群*****/
void GenerateNextPopulation (void)
{
SelectionOperator ();
CrossoverOperator ();
MutationOperator ();
}
/****function: evaluate population according to certain formula衡量群体*****/
void EvaluatePopulation (void)
{
CalculateObjectValue ();
CalculateFitnessValue ();
FindBestAndWorstIndividual ();
}
/*****function: to decode a binary chromosome into a decimal integer*****/
long DecodeChromosome (char *string,int point,int length)
{
int i;
long decimal=0L;
char *pointer;
for (i=0,pointer=string+point;i'0')<<(length-1-i);
}
return (decimal);
}
/***** function:to calculate object value f(x) = x sin(10πx) + 2.0 *****/
void CalculateObjectValue (void)
{
int i;
long temp;
double x;
/*** rosenbrock function***/
for (i=0;i0,CHROMLENGTH);
x=(RIGHT-LEFT)*temp/(pow(2,CHROMLENGTH)-1.0)+LEFT;
population[i].value=x*sin(10*PI*x)+2.0;
population[i].x=x;
}
}
/******function: to calculate fitness value *******/
void CalculateFitnessValue (void)
{
int i;
for(i=0;i/*****function to find out the best individual so far current generation*****/
void FindBestAndWorstIndividual (void)
{
int i;
double sum=0.0;
/*** find out the best and worst individual of this generation***/
bestindividual=population[0];
worstindividual=population[0];
for(i=1;iif (population[i].fitness>bestindividual.fitness)
{bestindividual=population[i];best_index=i;}
else if(population[i].fitness/***find out the best individual so far***/
if (generation==0){ currentbest=bestindividual;}
else
{
if(bestindividual.fitness>currentbest.fitness) {currentbest=bestindividual;}
}
}
/*****function:to perform evolution operation based on elitise mode. elitist model is to
replace the worst individual of this generation by the current best one保留最优个体*****/
void PerformEvolution (void)
{
if(bestindividual.fitness>currentbest.fitness){currentbest=population[best_index];}
else{population[worst_index]=currentbest;}
}
/*****function: to reproduce a chromosome by roulette wheel seclection*****/
void SelectionOperator (void)
{
int i,j,index;
double p,sum=0.0;
double cfitness[POPSIZE]; /*cumulative fitness value*/
struct individual newpopulation[POPSIZE];
/***calculate relative fitness***/
for(i=0;ifor(i=0;i/***calculate cumulative fitness***/
for(i=1;i1]+cfitness[i];}
/***selection operation***/
for(i=0;i1000)/1000.0;
index=0;
while(p>cfitness[index]){index++;}
newpopulation[i]=population[index];
}
for(i=0;i/*****function:crossover two chromosome by means of one-point crossover*****/
void CrossoverOperator (void)
{
int i,j;
int index[POPSIZE];
int point,temp;
double p;
char ch;
/***make a pair of individual randomly***/
for(i=0;ifor(i=0;i/***one-point crossover operation***/
for(i=0;i1;i+=2)
{
p=random(1000)/1000.0;
if(p1)+1;
for(j=point;j1]].chrom[j];
population[index[i+1]].chrom[j]=ch;
}
}
}
}
/*****function: mutation of a chromosome*****/
void MutationOperator (void)
{
int i,j;
double p;
/*** bit mutation***/
for(i=0;ifor(j=0;j1000)/1000.0;
if(p'0')?'1':'0';}
}
}
}
/*****function: output the results of current population*****/
void OutputTextReport (void)
{
int i;
double sum;
double average; /***average of population object value***/
/*** calculate average object value***/
sum=0.0;
for(i=0;i/***print results of this population ***/
printf("gen=%d, avg=%f, x=%f, best=%f ",generation,average,currentbest.x,currentbest.value);
printf("chromosome=");
for(i=0;i"%c",currentbest.chrom[i]);}
printf("\n");
}