sra安装后使用报错问题vdb-config --interactive

This sra toolkit installation has not been configured.
Before continuing, please run: vdb-config --interactive
For more information, see https://www.ncbi.nlm.nih.gov/sra/docs/sra-cloud/
  • 先不要设置环境变量,回到安装目录,执行./bin/vdb-config --interactive再使用即可
I find:

I have installed SRAToolkit.2.5.2 before and written it into the PATH variable.

So, it seems thatI executevdb-config --interactivemaybesratoolkit.2.5.2The next command. That is:sratoolkit.2.5.2. Instead, I just downloadedsratoolkit.2.10.7?

 

Solution to this discovery:

go withIn the directory of SRAToolkit.2.10.7, execute ./bin/vdb-config --interactive。

The configuration interface is different from the last configuration interface.

After the configuration is complete, then execute ./bin/fastq-dump command, no previous Error, perform success.

 

Change PATH, this is later.

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