linux学习100篇103:conda list

查看安装的软件

(rnaseq) root 12:41:09 ~
$ conda list
# packages in environment at /root/miniconda3/envs/rnaseq:
#
# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                 conda_forge    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
_openmp_mutex             4.5                       1_gnu    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
alsa-lib                  1.2.3                h516909a_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
boost-cpp                 1.74.0               h312852a_4    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
brotlipy                  0.7.0           py39h3811e60_1001    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
bzip2                     1.0.8                h7f98852_4    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
ca-certificates           2020.12.5            ha878542_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
cairo                     1.16.0            h6cf1ce9_1008    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
certifi                   2020.12.5        py39hf3d152e_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
cffi                      1.14.5           py39he32792d_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
chardet                   4.0.0            py39hf3d152e_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
click                     8.0.1            py39hf3d152e_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
colorama                  0.4.4              pyh9f0ad1d_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
coloredlogs               15.0             py39hf3d152e_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
colormath                 3.0.0                      py_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
commonmark                0.9.1                      py_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
cryptography              3.4.7            py39hbca0aa6_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
curl                      7.71.1               he644dc0_3    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
cutadapt                  3.4              py39h38f01e4_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
cycler                    0.10.0                     py_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
decorator                 4.4.2                      py_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
dnaio                     0.5.1            py39h38f01e4_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
fastp                     0.20.1               h2e03b76_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
fastqc                    0.11.9               hdfd78af_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
fontconfig                2.13.1            hba837de_1005    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
freetype                  2.10.4               h0708190_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
future                    0.18.2           py39hf3d152e_3    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
gettext                   0.19.8.1          h0b5b191_1005    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
giflib                    5.2.1                h36c2ea0_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
graphite2                 1.3.13            h58526e2_1001    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
harfbuzz                  2.8.1                h83ec7ef_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
hdf5                      1.10.5          nompi_h5b725eb_1114    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
hisat2                    2.2.1                h1b792b2_3    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
humanfriendly             9.1              py39hf3d152e_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
icu                       68.1                 h58526e2_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
idna                      2.10               pyh9f0ad1d_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
importlib-metadata        4.3.1            py39hf3d152e_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
isa-l                     2.30.0               ha770c72_4    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
jbig                      2.1               h7f98852_2003    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
jemalloc                  5.2.1                h9c3ff4c_5    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
jinja2                    3.0.1              pyhd8ed1ab_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
jpeg                      9d                   h36c2ea0_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
kiwisolver                1.3.1            py39h1a9c180_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
krb5                      1.17.2               h926e7f8_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
lcms2                     2.12                 hddcbb42_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
ld_impl_linux-64          2.35.1               hea4e1c9_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
lerc                      2.2.1                h9c3ff4c_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libblas                   3.9.0                9_openblas    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libcblas                  3.9.0                9_openblas    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libcurl                   7.71.1               hcdd3856_3    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libdeflate                1.7                  h7f98852_5    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libedit                   3.1.20191231         he28a2e2_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libffi                    3.3                  h58526e2_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libgcc                    7.2.0                h69d50b8_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libgcc-ng                 9.3.0               h2828fa1_19    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libgfortran-ng            9.3.0               hff62375_19    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libgfortran5              9.3.0               hff62375_19    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libglib                   2.68.2               h3e27bee_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libgomp                   9.3.0               h2828fa1_19    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libiconv                  1.16                 h516909a_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
liblapack                 3.9.0                9_openblas    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libopenblas               0.3.15          pthreads_h8fe5266_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libpng                    1.6.37               h21135ba_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libssh2                   1.9.0                ha56f1ee_6    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libstdcxx-ng              9.3.0               h6de172a_19    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libtiff                   4.3.0                hf544144_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libuuid                   2.32.1            h7f98852_1000    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libwebp-base              1.2.0                h7f98852_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libxcb                    1.13              h7f98852_1003    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
libxml2                   2.9.12               h72842e0_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
lz4-c                     1.9.3                h9c3ff4c_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
lzstring                  1.0.4                   py_1001    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
markdown                  3.3.4              pyhd8ed1ab_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
markupsafe                2.0.1            py39h3811e60_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
matplotlib-base           3.4.2            py39h2fa2bec_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
multiqc                   1.10.1             pyhdfd78af_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
ncbi-ngs-sdk              2.11.0               hff44eed_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
ncurses                   6.2                  h58526e2_4    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
networkx                  2.5.1              pyhd8ed1ab_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
numpy                     1.20.3           py39hdbf815f_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
olefile                   0.46               pyh9f0ad1d_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
openjdk                   11.0.9.1             h5cc2fde_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
openjpeg                  2.4.0                hb52868f_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
openssl                   1.1.1k               h7f98852_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
ossuuid                   1.6.2             hf484d3e_1000    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pcre                      8.44                 he1b5a44_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
perl                      5.26.2            h36c2ea0_1008    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
perl-app-cpanminus        1.7044                  pl526_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-business-isbn        3.004                   pl526_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-business-isbn-data   20140910.003            pl526_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-carp                 1.38                    pl526_3    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-constant             1.33                    pl526_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-data-dumper          2.173                   pl526_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-encode               2.88                    pl526_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-exporter             5.72                    pl526_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-extutils-makemaker   7.36                    pl526_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-file-path            2.16                    pl526_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-file-temp            0.2304                  pl526_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-mime-base64          3.15                    pl526_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-parent               0.236                   pl526_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-uri                  1.76                    pl526_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-xml-libxml           2.0132          pl526h7ec2d77_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-xml-namespacesupport 1.12                    pl526_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-xml-sax              1.02                    pl526_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-xml-sax-base         1.09                    pl526_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
perl-xsloader             0.24                    pl526_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
pigz                      2.6                  h27826a3_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pillow                    8.2.0            py39hf95b381_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pip                       21.1.2             pyhd8ed1ab_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pixman                    0.40.0               h36c2ea0_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pthread-stubs             0.4               h36c2ea0_1001    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pycparser                 2.20               pyh9f0ad1d_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pygments                  2.9.0              pyhd8ed1ab_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pyopenssl                 20.0.1             pyhd8ed1ab_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pyparsing                 2.4.7              pyh9f0ad1d_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pysocks                   1.7.1            py39hf3d152e_3    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
python                    3.9.4           hffdb5ce_0_cpython    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
python-dateutil           2.8.1                      py_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
python-isal               0.10.0           py39h3811e60_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
python_abi                3.9                      1_cp39    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
pyyaml                    5.4.1            py39h3811e60_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
readline                  8.1                  h46c0cb4_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
requests                  2.25.1             pyhd3deb0d_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
rich                      10.2.2           py39hf3d152e_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
salmon                    1.5.0                h84f40af_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
samtools                  1.7                           1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
setuptools                49.6.0           py39hf3d152e_3    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
simplejson                3.17.2           py39h3811e60_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
six                       1.16.0             pyh6c4a22f_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
spectra                   0.0.11                     py_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
sqlite                    3.35.5               h74cdb3f_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
sra-tools                 2.10.7          pl526haddd2b5_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
subread                   2.0.1                h5bf99c6_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
tbb                       2020.2               h4bd325d_4    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
tk                        8.6.10               h21135ba_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
tornado                   6.1              py39h3811e60_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
trim-galore               0.6.6                hdfd78af_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
typing_extensions         3.7.4.3                    py_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
tzdata                    2021a                he74cb21_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
urllib3                   1.26.5             pyhd8ed1ab_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
wheel                     0.36.2             pyhd3deb0d_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xopen                     1.1.0            py39hf3d152e_2    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-fixesproto           5.0               h7f98852_1002    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-inputproto           2.3.2             h7f98852_1002    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-kbproto              1.0.7             h7f98852_1002    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libice               1.0.10               h7f98852_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libsm                1.2.3             hd9c2040_1000    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libx11               1.7.1                h7f98852_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libxau               1.0.9                h7f98852_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libxdmcp             1.1.3                h7f98852_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libxext              1.3.4                h7f98852_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libxfixes            5.0.3             h7f98852_1004    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libxi                1.7.10               h7f98852_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libxrender           0.9.10            h7f98852_1003    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-libxtst              1.2.3             h7f98852_1002    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-recordproto          1.14.2            h7f98852_1002    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-renderproto          0.11.1            h7f98852_1002    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-xextproto            7.3.0             h7f98852_1002    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xorg-xproto               7.0.31            h7f98852_1007    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
xz                        5.2.5                h516909a_1    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
yaml                      0.2.5                h516909a_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
zipp                      3.4.1              pyhd8ed1ab_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
zlib                      1.2.11            h516909a_1010    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
zstd                      1.5.0                ha95c52a_0    https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
(rnaseq) root 12:47:39 ~

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