NGS pipeline in Github

最近被逼迫着在调研组学的数据，在浏览Github的时候也看见了一些大神做过的pipeline，这简直对于我这个小菜鸡来说就是福音，这一下可能是看不完了，先记录下来慢慢学习吧！
推荐：

1. https://github.com/crazyhottommy/
2. https://github.com/xuzhougeng/R-ChIP-data-analysis
3. https://github.com/xuzhougeng/RNA-seq-downstream-analysis
4. https://github.com/jchap14
5. https://github.com/jmzeng1314/NGS-pipeline
6. https://github.com/jmzeng1314/scRNA_10X
7. https://github.com/hbctraining/Intro-to-ChIPseq
   还有两个用stringtie组装转录本简单lncRNA的bash脚本：
8. https://github.com/zhaoshuoxp/lncRNA/blob/master/lncRNA.sh
9. https://github.com/Dukunbioinfo/pipeline-for-lncRNAs/blob/master/lncRNAIdentification.sh

GWAS相关的pipeline

10. https://github.com/MareesAT/GWA_tutorial/