机器学习(周志华) 西瓜书 第四章课后习题4.3—— Python实现
机器学习(周志华) 西瓜书 第四章课后习题4.3—— Python实现
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实验题目
试编程实现基于信息熵进行划分选择的决策树算法，并为表4.3中数据生成一棵决策树。
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实验原理
决策树基本算法：
基于信息熵增益的划分选择：
连续值处理：
缺省值处理
详见西瓜书4.4.2：缺失值处理讲解
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实验过程
数据集获取
获取书中的西瓜数据集3.0，并存为data_3.txt
编号,色泽,根蒂,敲声,纹理,脐部,触感,密度,含糖率,好瓜
1,青绿,蜷缩,浊响,清晰,凹陷,硬滑,0.697,0.46,是
2,乌黑,蜷缩,沉闷,清晰,凹陷,硬滑,0.774,0.376,是
3,乌黑,蜷缩,浊响,清晰,凹陷,硬滑,0.634,0.264,是
4,青绿,蜷缩,沉闷,清晰,凹陷,硬滑,0.608,0.318,是
5,浅白,蜷缩,浊响,清晰,凹陷,硬滑,0.556,0.215,是
6,青绿,稍蜷,浊响,清晰,稍凹,软粘,0.403,0.237,是
7,乌黑,稍蜷,浊响,稍糊,稍凹,软粘,0.481,0.149,是
8,乌黑,稍蜷,浊响,清晰,稍凹,硬滑,0.437,0.211,是
9,乌黑,稍蜷,沉闷,稍糊,稍凹,硬滑,0.666,0.091,否
10,青绿,硬挺,清脆,清晰,平坦,软粘,0.243,0.267,否
11,浅白,硬挺,清脆,模糊,平坦,硬滑,0.245,0.057,否
12,浅白,蜷缩,浊响,模糊,平坦,软粘,0.343,0.099,否
13,青绿,稍蜷,浊响,稍糊,凹陷,硬滑,0.639,0.161,否
14,浅白,稍蜷,沉闷,稍糊,凹陷,硬滑,0.657,0.198,否
15,乌黑,稍蜷,浊响,清晰,稍凹,软粘,0.36,0.37,否
16,浅白,蜷缩,浊响,模糊,平坦,硬滑,0.593,0.042,否
17,青绿,蜷缩,沉闷,稍糊,稍凹,硬滑,0.719,0.103,否
算法实现
数据定义，定义属性及其取值种类、类标签种类
读取数据函数：
叶节点选择标签函数：
判断D中样本在A上的取值是否相同函数
计算给定数据集的熵函数
计算按key划分的信息增益值函数
生成连续值属性的候选划分点集合T
计算样本D基于划分点t二分后的连续值属性信息增益
找出最大增益划分点
从A中选择最优的划分属性值，若为连续值，返回划分点
递归生成决策树
测试决策树的准确率
深度优先遍历，判断预测值
绘制树图的模块：
详见 https://blog.csdn.net/weixin_37922777/article/details/88821957
主函数：
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实验结果
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程序清单：
import json
import math
import plotTree
import numpy as np
import pandas as pd
D_keys = {
'色泽': ['青绿', '乌黑', '浅白'],
'根蒂': ['蜷缩', '硬挺', '稍蜷'],
'敲声': ['清脆', '沉闷', '浊响'],
'纹理': ['稍糊', '模糊', '清晰'],
'脐部': ['凹陷', '稍凹', '平坦'],
'触感': ['软粘', '硬滑'],
}
keys = ['是', '否']
# 读取数据
def loadData(filename):
dataSet = pd.read_csv(filename)
return dataSet
# 叶节点选择其类别为D中样本最多的类
def choose_largest_example(D):
count = D['好瓜'].value_counts()
return '是' if count['是'] > count['否'] else '否'
# 判断D中的样本在A上的取值是否相同
def same_value(D, A):
for key in A:
if key in D_keys and len(D[key].value_counts()) > 1:
return False
return True
# 计算给定数据集的熵
def calc_Ent(dataSet):
numEntries = dataSet['power'].sum()
Count = dataSet.groupby('好瓜')['power'].sum()
Ent = 0.0
for key in keys:
#print(Count[key])
if key not in Count:
Ent -= 0.0
else:
prob = Count[key] / numEntries
Ent -= prob * math.log(prob, 2)
return Ent
# 计算按key划分的信息增益值
def calc_Gain_D(D, D_no_nan, key, Ent_D):
Ent = 0.0
D_size = D['power'].sum()
D_nan_size = D_no_nan['power'].sum()
for value in D_keys[key]:
Dv = D.loc[D[key]==value]
Dv_size = Dv['power'].sum()
Ent_Dv = calc_Ent(Dv)
Ent += Dv_size/D_nan_size * Ent_Dv
return D_nan_size/D_size * (Ent_D-Ent)
# 生成连续值属性的候选划分点集合T
def candidate_T(D, key, n):
L = set(D[key])
T = []
a, Sum = 0, 0
for value in L:
Sum += value
a += 1
if a == n:
T.append(Sum/n)
a, Sum = 0, 0
if a > 0:
T.append(Sum/a)
return T
# 计算样本D基于划分点t二分后的连续值属性信息增益
def calc_Gain_t(D, D_no_nan, key, t, Ent_D):
Ent = 0.0
D_size = D['power'].sum()
D_nan_size = D_no_nan['power'].sum()
Dv = D.loc[D[key]<=t]
Dv_size = Dv['power'].sum()
Ent_Dv = calc_Ent(Dv)
Ent += Dv_size/D_nan_size * Ent_Dv
Dv = D.loc[D[key]>t]
Dv_size = Dv['power'].sum()
Ent_Dv = calc_Ent(Dv)
Ent += Dv_size/D_nan_size * Ent_Dv
return D_nan_size/D_size * (Ent_D-Ent)
# 计算样本D基于不同划分点t二分后的连续值属性信息增益，找出最大增益划分点
def calc_Gain_C(D, D_no_nan, key, Ent_D):
n = 2
T = candidate_T(D, key, n)
max_Gain, max_partition = -1, -1
for t in T:
Gain = calc_Gain_t(D, D_no_nan, key, t, Ent_D)
if max_Gain < Gain:
max_Gain = Gain
max_partition = t
return max_Gain, max_partition
# 从A中选择最优的划分属性值，若为连续值，返回划分点
def choose_best_attribute(D, A):
max_Gain, max_partition, partition, best_attr = -1, -1, -1, ''
for key in A:
# 划分属性为离散属性时
if key in D_keys:
D_no_nan = D.loc[pd.notna(D[key])]
Ent_D = calc_Ent(D_no_nan)
Gain = calc_Gain_D(D, D_no_nan, key, Ent_D)
# 划分属性为连续属性时
else:
D_no_nan = D.loc[pd.notna(D[key])]
Ent_D = calc_Ent(D_no_nan)
Gain, partition = calc_Gain_C(D, D_no_nan, key, Ent_D)
if max_Gain < Gain:
best_attr = key
max_Gain = Gain
max_partition = partition
return best_attr, max_partition
# 函数TreeGenerate 递归生成决策树，以下情形导致递归返回
# 1. 当前结点包含的样本全属于一个类别
# 2. 当前属性值为空， 或是所有样本在所有属性值上取值相同，无法划分
# 3. 当前结点包含的样本集合为空，不可划分
def TreeGenerate(D, A):
Count = D['好瓜'].value_counts()
if len(Count) == 1:
return D['好瓜'].values[0]
if len(A)==0 or same_value(D, A):
return choose_largest_example(D)
node = {}
best_attr, partition = choose_best_attribute(D, A)
D_size = D.shape[0]
# 最优划分属性为离散属性时
if best_attr in D_keys:
for value in D_keys[best_attr]:
Dv = D.loc[D[best_attr]==value].copy()
Dv_size = Dv.shape[0]
Dv.loc[pd.isna(Dv[best_attr]), 'power'] = Dv_size / D_size
if Dv.shape[0] == 0:
node[value] = choose_largest_example(D)
else:
new_A = [key for key in A if key != best_attr]
node[value] = TreeGenerate(Dv, new_A)
# 最优划分属性为连续属性时
else:
#print(best_attr, partition)
#print(D.values)
left = D.loc[D[best_attr] <= partition].copy()
Dv_size = left.shape[0]
left.loc[pd.isna(left[best_attr]), 'power'] = Dv_size / D_size
left_key = '<= ' + str(partition)
if left.shape[0] == 0:
node[left_key] = choose_largest_example(D)
else:
node[left_key] = TreeGenerate(left, A)
right = D.loc[D[best_attr] > partition].copy()
Dv_size = right.shape[0]
right.loc[pd.isna(right[best_attr]), 'power'] = Dv_size / D_size
right_key = '> ' + str(partition)
if right.shape[0] == 0:
node[right_key] = choose_largest_example(D)
else:
node[right_key] = TreeGenerate(right, A)
# plotTree.plotTree(Tree)
return {best_attr: node}
# 获得下一层子树分支
def get_next_Tree(Tree, key, value):
if key not in D_keys:
partition = float(list(Tree[key].keys())[0].split(' ')[1])
if value <= partition:
value = '<= ' + str(partition)
else:
value = '> ' + str(partition)
return Tree[key][value]
# 深度优先遍历，判断预测值
def dfs_Tree(Tree, row):
if type(Tree).__name__ == 'dict':
key = list(Tree.keys())[0]
value = row[key]
if pd.isnull(value):
result = {key: 0 for key in D_keys['好瓜']}
for next_key in Tree[key]:
next_Tree = Tree[key][next_key]
temp = dfs_Tree(next_Tree, row)
result[temp] += 1
return '是' if count['是'] > count['否'] else '否'
else:
next_Tree = get_next_Tree(Tree, key, value)
return dfs_Tree(next_Tree, row)
else:
return Tree
# 测试决策树的准确率
def test_Tree(Tree, data_test):
accuracy = 0
for index, row in data_test.iterrows():
result = dfs_Tree(Tree, row)
if result == row['好瓜']:
#print(row.values, Tree)
accuracy += 1
print('Hit:', accuracy, '/', data_test.shape[0])
print('Accuracy:', accuracy/data_test.shape[0])
if __name__ == '__main__':
# 读取数据
filename = 'data_3.txt'
dataSet = loadData(filename)
dataSet.drop(columns=['编号'], inplace=True)
# 考虑缺失值
dataSet['power'] = 1.0
index_train = [0,1,2,5,6,9,13,14,15,16]
data_train = dataSet.iloc[index_train]
data_test = dataSet.drop(index_train)
# 决策树训练
A = [column for column in data_train.columns if column != '好瓜']
Tree = TreeGenerate(data_train, A)
# 决策树测试
test_Tree(Tree, data_test)
print(Tree)
plotTree.createPlot(Tree)