专栏十:10X单细胞的聚类树绘图

经常在文章中看到对细胞群进行聚类,以证明两个cluster之间的相关性,这里总结两种绘制这种图的方式和代码,当然我觉得这些五颜六色的颜色可能是后期加的,本帖子只总结画树状图的方法

例一

文章Single-cell analyses implicate ascites in remodeling the ecosystems of primary and metastatic tumors in ovarian cancer

1.图1

专栏十:10X单细胞的聚类树绘图_第1张图片

Hierarchical clustering comparing the similarity of myeloid cell clusters in our dataset (OC) with those reported in CRC and HCC. Clusters were colored by dataset. n = 3 tumor types were used for analysis

文中的描述是:As expected, both cDC1 and cDC2 from different cancer types or tissue sources were clustered together, indicating their conserved phenotypes.

2.图2

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