kallisto(2018-06-25)

wget -c https://pachterlab.github.io/kallisto/download


kallisto index -i arab_kallisto /home/andengdi/lyr/bear_rna_seq/arab_RSEM/arab_rsem.transcripts.fa
kallisto quant -i arab_kallisto/arab_kallisto -o 05kallisto_out/sample1 02clean_data/sample1_paired_clean_R1.fastq.gz 02clean_data/sample1_paired_clean_R2.fastq.gz

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