放射组学常用到的一些工具(软件)

这几天看到一篇文章是关于“Computational resources for radiomics”,对里面涉及的工具(软件)做了一下总结,感兴趣的可以找一下原paper(下载链接:http://tcr.amegroups.com/article/download/8409/pdf)看看。

Treatment planning systems/查看工具(勾画ROI)

  1. 3DSlicer(www.slicer.org)

  2. MIM(www.mimsoftware.com)

  3. itk-SNAP(www.itksnap.org)

  4. DefiniensLung Tumor Analysis (LuTA) tool (www.definiens.com)

  5. Velocity ROI delineation tool (www.velocitymedical.com)

Image feature extraction/特征提取工具:

  1. TexRAD(www. texrad.com)

  2. MaZda(http://eletel.eu/mazda)

  3. Chang-Gung Image Texture Analysis (CGITA) (http://code.google.com/p/cgita)

  4. IBEX (Stand-aloneIBEX: http://bit.ly/IBEX_MDAnderson;
    Source-code version: http://bit.ly/IBEXSrc_MDAnderson)

  5. Computational environment for radiotherapy research (CERR) (www.cerr.info)

  6. ITK,itk.org

Modeling/statistical analysis/分析特征的工具

  1. R (www.r-project.org/).

  2. SPSS(www.ibm.com/software/analytics/spss).

  3. Stata(www.stata.com).

  4. MedCalc(www.medcalc.org).

  5. Bioconductor(www.bioconductor.org).

  6. Weka(www.cs.waikato.ac.nz/ml/weka/).

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