网页观察TMHMM和singalp

跨膜域判断:%pred NB(0): i 1 6, M 7 29, O 30 579
这一行中有M的则表示有跨膜域。
AP家族有signalIP和跨膜域。

PL家族(PL1,PL4)没有sginalP以及跨膜域。
GT1家族没有sginalP以及跨膜域
GT2家族有跨膜域,并且有的有很多跨膜区:因为他们有很多的M值
如下图所示:

>Aquca_002_00287.1 Phytozome-plant Aquilegia coerulea GT2 190-365
%len 647
%lett A:29 C:12 D:25 E:35 F:45 G:32 H:8 I:49 K:48 L:89 M:17 N:28 P:23 Q:30 R:26 S:45 T:22 V:47 W:15 Y:22
%score BG 2723.668119 (4.209688 per character)
%score FW 2737.852836 (4.231612 per character)
%score NB(0) 2751.429163 (4.252595 per character)
%score LO(0) -27.761044 (-0.042907 per character)
%pred NB(0): o 1 37, M 38 56, i 57 75, M 76 98, o 99 127, M 128 150, i 151 456, M 457 476, o 477 490, M 491 513, i 514 601, M 602 624, o 625 647
   MENPERFSIVEIKSFPEKQKAKNTKQITWFLLLKVMKVIGCLSWLATGFWSVLGIIKKRVMNSKRREESHKM
?0 oooooooooooooooooooooooooooooooooooooMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiii

   GKLLRFLRALLVVSVVLLVLEVIAYFKGWNLNDLIFIQPLQTEGVLLMFYLGWLSIRAGYIAPLVVTLSKLC
?0 iiiMMMMMMMMMMMMMMMMMMMMMMMoooooooooooooooooooooooooooooMMMMMMMMMMMMMMMMM

   IYLFMIQSLDRIILCLRCFWIKYKKIKLKVAGEAYVTVDDFPMVLVQVPMCNEKEVYAQSISAVCQFDWPRD
?0 MMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

   RFLVQILDDSDDYDTQNLIKNEVSSWRQKGVNIVYRHRLVRTGYKAGNLKSGMSCDYVKDYEYVAIFDADFQ
?0 iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

   PNPDFLKLTVPHFKGNSELGLVQARWSFINKDENLLTRLQNINLCFHFEVEQQVNGIFLNFFGFNGTAGVWR
?0 iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

   IKALEGSGGWMDRTTVEDMDIAVRAHLNGWKFIFLNDVNVLCELPESYEAYKKQQHRWHSGPMQLFRLCFSS
?0 iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

   IITSKISVSKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPTWLICYIPIFMSILNILPAPKY
?0 iiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMooooooooooooooMMMMMMMMMMMMMM

   FPFLIPYLLFENTMSVTKFSAMVSGLLNLGSAYEWVVTKKTGRSSQSDLLDEEELKSPSQLQQQVQDSESGI
?0 MMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

   VMLNKLEEQIEVPLSKKRNKIYQKELALAFLLLTASARSILSAQGIHFYFLLFQGLSFLIVGLDLIGEQKK
?0 iiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooo


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